source: trunk/zoo-project/zoo-kernel/service_internal_hpc.c @ 917

Last change on this file since 917 was 917, checked in by djay, 14 months ago

Merge prototype-v0 branch in trunk

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1/*
2 * Author : Gérald FENOY
3 *
4 * Copyright (c) 2017 GeoLabs SARL
5 *
6 * This work was supported by public funds received in the framework of GEOSUD,
7 * a project (ANR-10-EQPX-20) of the program "Investissements d'Avenir" managed
8 * by the French National Research Agency
9 *
10 * Permission is hereby granted, free of charge, to any person obtaining a copy
11 * of this software and associated documentation files (the "Software"), to deal
12 * in the Software without restriction, including without limitation the rights
13 * to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
14 * copies of the Software, and to permit persons to whom the Software is
15 * furnished to do so, subject to the following conditions:
16 *
17 * The above copyright notice and this permission notice shall be included in
18 * all copies or substantial portions of the Software.
19 *
20 * THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
21 * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
22 * FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
23 * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
24 * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
25 * OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN
26 * THE SOFTWARE.
27 *
28 */
29
30#include "service_internal_hpc.h"
31#include "response_print.h"
32#include "server_internal.h"
33#include "service_callback.h"
34#include "mimetypes.h"
35#include <sys/un.h>
36
37typedef struct {
38  maps* conf;
39  char* local_file;
40  char* target_file;
41} local_params;
42
43/**
44 * Add nested outputs to every outputs that is geographic format
45 * @see isGeographic
46 * @param s the service current definition
47 */ 
48void addNestedOutputs(service** s){
49  if((*s)==NULL){
50    return;
51  }   
52  if(*s==NULL || (*s)->outputs==NULL || (*s)->content==NULL){
53    return;
54  }
55  elements *out=(*s)->outputs;
56  elements* cur=out;
57  map* serviceType=getMap((*s)->content,"ServiceType");
58  if(strncmp(serviceType->value,"HPC",3)!=0)
59    return;
60  while(cur!=NULL && cur->defaults!=NULL){
61    map* mimeType=getMap(cur->defaults->content,"mimeType");
62    map* useMS=getMap(cur->defaults->content,"useMapserver");
63    if(mimeType!=NULL && useMS!=NULL && strncasecmp(useMS->value,"true",4)==0){
64      int geo=isGeographic(mimeType->value);
65      if(geo>0){
66        elements *tmp[3]={
67          dupElements(cur),
68          dupElements(cur),
69          dupElements(cur)
70        };
71        char *geoLink="wcs_link";
72        if(geo==2){
73          geoLink="wfs_link";
74        }
75        int i=0;
76        for(;i<3;i++){
77          if(tmp[i]->next!=NULL){
78            freeElements(&tmp[i]->next);
79            free(tmp[i]->next);
80            tmp[i]->next=NULL;
81          }
82          free(tmp[i]->name);
83          if(tmp[i]->format!=NULL)
84            free(tmp[i]->format);
85          tmp[i]->format=zStrdup("ComplexData");
86          freeMap(&tmp[i]->content);
87          free(tmp[i]->content);
88          tmp[i]->content=NULL;
89          switch(i){
90          case 0:
91            tmp[i]->name=zStrdup("download_link");
92            tmp[i]->content=createMap("Title",_("Download link"));
93            addToMap(tmp[i]->content,"Abstract",_("The download link"));
94            addToMap(tmp[i]->defaults->content,"useMapserver","false");
95            if(tmp[i]->supported!=NULL){
96              freeIOType(&tmp[i]->supported);
97              free(tmp[i]->supported);
98              tmp[i]->supported=NULL;
99            }
100            break;
101          case 1:
102            tmp[i]->name=zStrdup("wms_link");
103            tmp[i]->content=createMap("Title",_("WMS link"));
104            addToMap(tmp[i]->content,"Abstract",_("The WMS link"));
105            if(tmp[i]->supported!=NULL && tmp[i]->supported->next!=NULL){
106              freeIOType(&tmp[i]->supported->next);
107              free(tmp[i]->supported->next);
108              tmp[i]->supported->next=NULL;
109            }else{
110              if(tmp[i]->supported!=NULL)
111                addToMap(tmp[i]->supported->content,"useMapserver","true");
112              addToMap(tmp[i]->defaults->content,"useMapserver","true");
113            }
114            break;
115          case 2:
116            if(geo==2){
117              tmp[i]->name=zStrdup("wfs_link");
118              tmp[i]->content=createMap("Title",_("WFS link"));
119              addToMap(tmp[i]->content,"Abstract",_("The WFS link"));
120            }else{
121              tmp[i]->name=zStrdup("wcs_link");
122              tmp[i]->content=createMap("Title",_("WCS link"));
123              addToMap(tmp[i]->content,"Abstract",_("The WCS link"));
124            }
125            if(tmp[i]->supported!=NULL && tmp[i]->supported->next!=NULL &&
126               tmp[i]->supported->next->content!=NULL){
127              freeIOType(&tmp[i]->supported);
128              free(tmp[i]->supported);
129              tmp[i]->supported=NULL;
130              tmp[i]->supported=createIoType();
131              iotype* cnext=cur->supported->next;
132              tmp[i]->supported->content=createMap(cnext->content->name,cnext->content->value);
133              addMapToMap(&tmp[i]->supported->content,cnext->content->next);
134              addToMap(tmp[i]->supported->content,"useMapserver","true");
135            }else
136              addToMap(tmp[i]->defaults->content,"useMapserver","true");
137            break;
138          }
139        }
140        addToElements(&cur->child,tmp[0]);
141        addToElements(&cur->child,tmp[1]);
142        addToElements(&cur->child,tmp[2]);
143        free(cur->format);
144        cur->format=NULL;
145        if(cur->defaults!=NULL){
146          freeIOType(&cur->defaults);
147          free(cur->defaults);
148          cur->defaults=NULL;
149        }
150        if(cur->supported!=NULL){
151          freeIOType(&cur->supported);
152          free(cur->supported);
153          cur->supported=NULL;
154        }
155        freeElements(&tmp[2]);
156        free(tmp[2]);
157        freeElements(&tmp[1]);
158        free(tmp[1]);
159        freeElements(&tmp[0]);
160        free(tmp[0]);
161        //addToMap(cur->content,"internal","true");
162      }     
163    }else{
164      if(mimeType!=NULL){
165        elements *tmp=dupElements(cur);
166        tmp->name=zStrdup("download_link");
167        tmp->content=createMap("Title",_("Download link"));
168        addToMap(tmp->content,"Abstract",_("The download link"));
169        addToMap(tmp->defaults->content,"useMapserver","false");
170        if(tmp->supported!=NULL){
171          freeIOType(&tmp->supported);
172          free(tmp->supported);
173          tmp->supported=NULL;
174        }
175        addToElements(&cur->child,tmp);
176        free(cur->format);
177        cur->format=NULL;
178        if(cur->defaults!=NULL){
179          freeIOType(&cur->defaults);
180          free(cur->defaults);
181          cur->defaults=NULL;
182        }
183        if(cur->supported!=NULL){
184          freeIOType(&cur->supported);
185          free(cur->supported);
186          cur->supported=NULL;
187        }
188        freeElements(&tmp);
189        free(tmp);
190      }
191    }
192    cur=cur->next;
193  }
194  //dumpElements((*s)->outputs);
195}
196
197/**
198 * Acquire a read lock on every files used as input for executing a service.
199 * @param conf the main configuration file map
200 * @return 0 if every file can be locked, -1 if one lock has failed.
201 */
202int addReadLocks(maps** conf){
203  map* queueLengthMap=getMapFromMaps(*conf,"uploadQueue","length");
204  maps* queueMaps=getMaps(*conf,"uploadQueue");
205  if(queueLengthMap!=NULL){
206    int cnt=atoi(queueLengthMap->value);
207    int i=0;
208    for(i=0;i<cnt;i++){
209      map* argv[2]={
210        getMapArray(queueMaps->content,"input",i),
211        getMapArray(queueMaps->content,"localPath",i)
212      };
213      zooLock* lck;
214      if((lck=lockFile(*conf,argv[1]->value,'r'))==NULL){
215        char* templateStr=_("Unable to lock the file for %s in read mode.");
216        char *tmpMessage=(char*)malloc((strlen(templateStr)+strlen(argv[0]->value)+1)*sizeof(char));
217        sprintf(tmpMessage,templateStr,argv[0]->value);
218        setMapInMaps(*conf,"lenv","message",tmpMessage);
219        free(tmpMessage);
220        return -1;
221      }else{
222        if(zoo_file_locks_cnt==0){
223          zoo_file_locks=(zooLock**)malloc(sizeof(zooLock*));
224        }
225        else{
226          zoo_file_locks=(zooLock**)realloc(zoo_file_locks,(zoo_file_locks_cnt+1)*sizeof(zooLock*));
227        }
228        zoo_file_locks[zoo_file_locks_cnt]=lck;
229        zoo_file_locks_cnt++;
230      }
231    }
232  }
233  return 0;
234}
235
236/**
237 * Remove all read locks set for files used as input for executing the service.
238 * @param conf the main configuration maps pointer
239 * @return 0 in case of success, -1 if any error occured. In case of error, one
240 * can refer to the message map array from the lenv section.
241 */
242int removeReadLocks(maps** conf){
243  int res=0;
244  int nberr=0;
245  map* queueLengthMap=getMapFromMaps(*conf,"uploadQueue","length");
246  maps* queueMaps=getMaps(*conf,"uploadQueue");
247  if(queueLengthMap!=NULL){
248    int cnt=atoi(queueLengthMap->value);
249    int i=0;
250    for(i=0;i<cnt;i++){
251      if(unlockFile(*conf,zoo_file_locks[i])<1){
252        map* argv=getMapArray(queueMaps->content,"input",i);
253        char* templateStr=_("Unable to unlock the file for %s after execution.");
254        char *tmpMessage=(char*)malloc((strlen(templateStr)+strlen(argv->value)+1)*sizeof(char));
255        sprintf(tmpMessage,templateStr,argv->value);
256        maps* lenv=getMaps(*conf,"lenv");
257        setMapArray(lenv->content,"message",nberr,tmpMessage);
258        free(tmpMessage);
259        res=-1;
260        nberr++;
261      }
262    }
263  }
264  free(zoo_file_locks);
265  return res;
266}
267
268/**
269 * Get the section name depending on number of features and/or pixels of each
270 * inputs and the threshold defined in a section.
271 * It supposes that your inputs has been published using MapServer support,
272 * implying that the number of features (nb_features), respectively pixels
273 * (nb_pixels), are defined. The section, identified by confId, should contain
274 * preview_max_features and preview_max_pixels defining the threshold values.
275 * @param conf the main configuration file maps pointer
276 * @param inputs the inputs maps pointer
277 * @param confId the section identifier
278 * @return "preview_conf" in case the numbers are lower than the threshold,
279 * "fullres_conf" in other cases.
280 */
281char* getConfiguration(maps** conf,maps** inputs,const char* confId){
282  maps* input=*inputs;
283  map* max_pixels=getMapFromMaps(*conf,confId,"preview_max_pixels");
284  map* max_features=getMapFromMaps(*conf,confId,"preview_max_features");
285  int i_max_pixels=atoi(max_pixels->value);
286  int i_max_features=atoi(max_features->value);
287  while(input!=NULL && input->content!=NULL){
288    map* tmpMap=getMap(input->content,"geodatatype");
289    if(tmpMap!=NULL){
290      map* currentNb;
291      if(strcasecmp(tmpMap->value,"raster")==0 ){
292        currentNb=getMap(input->content,"nb_pixels");
293        if(atoi(currentNb->value)>i_max_pixels)
294          return "fullres_conf";
295      }else{
296        if(strcasecmp(tmpMap->value,"vector")==0 ){
297          currentNb=getMap(input->content,"nb_features");
298          if(atoi(currentNb->value)>i_max_features)
299            return "fullres_conf";
300        }
301      }
302    }
303    input=input->next;
304  }
305  return "preview_conf";
306}
307
308/**
309 * Load and run a HPC Application corresponding to the service.
310 *
311 * @param main_conf the conf maps containing the main.cfg settings
312 * @param request the map containing the HTTP request
313 * @param s the service structure
314 * @param real_inputs the maps containing the inputs
315 * @param real_outputs the maps containing the outputs
316 * @return SERVICE_SUCCEEDED in case of success, -1 or SERVICE_FAILED when failing.
317 */
318int zoo_hpc_support(maps** main_conf,map* request,service* s,maps **real_inputs,maps **real_outputs){
319  maps* m=*main_conf;
320  maps* inputs=*real_inputs;
321  maps* outputs=*real_outputs;
322  map* tmp0=getMapFromMaps(*main_conf,"lenv","cwd");
323  char *ntmp=tmp0->value;
324  map* tmp=NULL;
325  int res=-1;
326  // Get the configuration id depending on service type and defined thresholds
327  // then, set the configId key in the lenv section
328  char *serviceType;
329  map* mServiceType=getMap(s->content,"confId");
330  if(mServiceType!=NULL)
331    serviceType=mServiceType->value;
332  else
333    serviceType="HPC";
334  map* tmpPath=getMapFromMaps(*main_conf,"main","tmpPath");
335  map* uuid=getMapFromMaps(*main_conf,"lenv","usid");
336  map* confMap=getMapFromMaps(*main_conf,serviceType,getConfiguration(main_conf,real_inputs,serviceType));
337  char * configurationId=confMap->value;
338  setMapInMaps(*main_conf,"lenv","configId",configurationId);
339  // Dump lenv maps again after having set the configId ...
340  char *flenv =
341    (char *)
342    malloc ((strlen (tmpPath->value) + 
343             strlen (uuid->value) + 12) * sizeof (char));
344  sprintf (flenv, "%s/%s_lenv.cfg", tmpPath->value, uuid->value);
345  maps* lenvMaps=getMaps(m,"lenv");
346  dumpMapsToFile(lenvMaps,flenv,0);
347  free(flenv);
348
349  map* targetPathMap=getMapFromMaps(*main_conf,configurationId,"remote_data_path");
350  map* targetPersistentPathMap=getMapFromMaps(*main_conf,configurationId,"remote_persistent_data_path");
351 
352  pthread_t threads_pool[50];
353  // Force the HPC services to be called asynchronously
354  map* isAsync=getMapFromMaps(*main_conf,"lenv","async");
355  if(isAsync==NULL){
356    errorException(*main_conf,_("The synchronous mode is not supported by this type of service"),"NoSuchMode",s->name);
357    return -1;
358  }
359
360  maps* input=*real_inputs;
361  char **parameters=NULL;
362  int parameters_cnt=0;
363  while(input!=NULL && input->content!=NULL){
364    map* isInRequest=getMap(input->content,"inRequest");
365    map* minNb=getMap(input->content,"minOccurs");
366    if(getMaps(*real_outputs,input->name)==NULL &&
367       ( (isInRequest!=NULL && strncasecmp(isInRequest->value,"true",4)==0)
368         || (minNb!=NULL && atoi(minNb->value)>0) ) ){
369      parameters_cnt+=1;
370      if(parameters_cnt==1)
371        parameters=(char**)malloc(parameters_cnt*sizeof(char*));
372      else
373        parameters=(char**)realloc(parameters,parameters_cnt*sizeof(char*));
374      if(getMap(input->content,"mimeType")!=NULL){
375        // Input is ComplexData
376        if(getMap(input->content,"cache_file")==NULL){
377          // Input data has been passed by value
378          // TODO: publish input through MapServer / use output publication
379          dumpMapsValuesToFiles(main_conf,&input);
380          addToMap(input->content,"toPublish","true");
381          //addToMap(input->content,"useMapserver","true");
382        }
383        if(getMap(input->content,"cache_file")!=NULL){
384          map* length=getMap(input->content,"length");
385          if(length==NULL){
386            addToMap(input->content,"length","1");
387            length=getMap(input->content,"length");
388          }
389          int len=atoi(length->value);
390          int i=0;
391          for(i=0;i<len;i++){
392            map* tmp=getMapArray(input->content,"cache_file",i);
393            map* origin=getMapArray(input->content,"origin",i);
394            char* targetName=strrchr(tmp->value,'/');
395            char *targetPath;
396            if(origin!=NULL && strcasecmp(origin->value,"SHARED")==0 && targetPersistentPathMap!=NULL){
397              targetPath=(char*)malloc((strlen(targetPersistentPathMap->value)+strlen(targetName)+2)*sizeof(char));
398              sprintf(targetPath,"%s/%s",targetPersistentPathMap->value,targetName);
399            }
400            else{
401              targetPath=(char*)malloc((strlen(targetPathMap->value)+strlen(targetName)+2)*sizeof(char));
402              sprintf(targetPath,"%s/%s",targetPathMap->value,targetName);
403            }
404            setMapArray(input->content,"targetPath",i,targetPath);
405            setMapArray(input->content,"localPath",i,tmp->value);
406            map* tmp1=getMapArray(input->content,"value",i);
407            if(tmp1!=NULL){
408              free(tmp1->value);
409              tmp1->value=strdup("empty");
410            }
411            if(i==0){
412              parameters[parameters_cnt-1]=(char*)malloc((strlen(input->name)+strlen(targetPath)+3)*sizeof(char));
413              sprintf(parameters[parameters_cnt-1],"-%s %s",input->name,targetPath);
414            }else{
415              fprintf(stderr,"%s %d\n",__FILE__,__LINE__);
416              fflush(stderr);
417              char *tmpStr=zStrdup(parameters[parameters_cnt-1]);
418              parameters[parameters_cnt-1]=(char*)realloc(parameters[parameters_cnt-1],(strlen(tmpStr)+strlen(targetPath)+2)*sizeof(char));
419              sprintf(parameters[parameters_cnt-1],"%s %s",tmpStr,targetPath);
420              free(tmpStr);
421              fprintf(stderr,"%s %d\n",__FILE__,__LINE__);
422              fflush(stderr);
423            }
424            free(targetPath);
425          }
426          addToUploadQueue(main_conf,input);
427        }else{
428          // ???
429          fprintf(stderr,"%s %d\n",__FILE__,__LINE__);
430          fflush(stderr);
431        }
432      }else{
433        // LitteralData and BboxData
434        if(getMap(input->content,"dataType")!=NULL){
435          // For LitteralData, simply pass the value
436          map* length=getMap(input->content,"length");
437          if(length!=NULL){
438            char* value=NULL;
439            int len=atoi(length->value);
440            int i=0;
441            for(i=0;i<len;i++){
442              map* val=getMapArray(input->content,"value",i);
443              if(val!=NULL){
444                if(value==NULL){
445                  value=(char*)malloc((strlen(val->value)+3)*sizeof(char));
446                  sprintf(value,"\"%s\"",val->value);
447                }
448                else{
449                  value=(char*)realloc(value,(strlen(value)+strlen(val->value)+4)*sizeof(char));
450                  sprintf(value,"%s \"%s\"",value,val->value);
451                }
452              }
453            }
454            if(value!=NULL){
455              parameters[parameters_cnt-1]=(char*)malloc((strlen(input->name)+strlen(value)+3)*sizeof(char));
456              sprintf(parameters[parameters_cnt-1],"-%s %s",input->name,value);
457            }
458          }else{
459            map* val=getMap(input->content,"value");
460            parameters[parameters_cnt-1]=(char*)malloc((strlen(input->name)+strlen(val->value)+5)*sizeof(char));
461            sprintf(parameters[parameters_cnt-1],"-%s \"%s\"",input->name,val->value);
462          }
463        }
464      }
465    }
466    input=input->next;
467  }
468
469#ifdef HPC_DEBUG
470  fprintf(stderr,"************************* %s %d \n\n",__FILE__,__LINE__);
471#endif
472#ifdef USE_CALLBACK
473  invokeCallback(m,inputs,NULL,1,1);
474  invokeCallback(m,inputs,NULL,2,0);
475#endif 
476  if(getMapFromMaps(m,"lenv","mapError")!=NULL){
477#ifdef USE_CALLBACK
478    invokeCallback(*main_conf,inputs,NULL,7,0);
479#endif
480    return -1;
481  }
482#ifdef HPC_DEBUG
483  fprintf(stderr,"************************* %s %d \n\n",__FILE__,__LINE__);
484  dumpMaps(inputs);
485#endif
486
487  // Upload data on HPC
488  if(runUpload(main_conf)==false){
489    errorException (*main_conf, _("Unable to lock the file for upload!"),
490                    "InternalError", NULL);
491#ifdef HPC_DEBUG
492    fprintf(stderr,"************************* %s %d \n\n",__FILE__,__LINE__);
493#endif
494#ifdef USE_CALLBACK
495    invokeCallback(*main_conf,inputs,NULL,7,0);
496#endif
497#ifdef HPC_DEBUG
498    fprintf(stderr,"************************* %s %d \n\n",__FILE__,__LINE__);
499#endif
500    return -1;
501  }
502#ifdef HPC_DEBUG
503  fprintf(stderr,"************************* %s %d \n\n",__FILE__,__LINE__);
504#endif
505#ifdef USE_CALLBACK
506  invokeCallback(m,inputs,NULL,2,1);
507#endif
508#ifdef HPC_DEBUG
509  fprintf(stderr,"************************* %s %d \n\n",__FILE__,__LINE__);
510#endif
511
512  // Add the filename to generate for every output to parameters
513  input=*real_outputs;
514#ifdef HPC_DEBUG
515  dumpMaps(input);
516#endif
517  while(input!=NULL){
518    // Parse all outputs including inner outputs if required.
519    if(input->child==NULL){
520      // Name every files that should be produced by the service execution
521      map* mime=getMap(input->content,"mimeType");
522      char* targetName;
523      if(mime!=NULL){
524        bool hasExt=false;
525        map* fileExt=getFileExtensionMap(mime->value,&hasExt);
526        targetName=(char*)malloc((strlen(s->name)+strlen(input->name)+strlen(uuid->value)+strlen(fileExt->value)+11)*sizeof(char));
527        sprintf(targetName,"output_%s_%s_%s.%s",s->name,input->name,uuid->value,fileExt->value);
528        freeMap(&fileExt);
529        free(fileExt);
530      }else{
531        targetName=(char*)malloc((strlen(s->name)+strlen(input->name)+strlen(uuid->value)+14)*sizeof(char));
532        sprintf(targetName,"output_%s_%s_%s.tif",s->name,input->name,uuid->value);
533      }
534      char *targetPath=(char*)malloc((strlen(targetPathMap->value)+strlen(targetName)+2)*sizeof(char));
535      sprintf(targetPath,"%s/%s",targetPathMap->value,targetName);
536      map *tmpUrl=getMapFromMaps(*main_conf,"main","tmpUrl");
537      char *targetUrl=(char*)malloc((strlen(tmpUrl->value)+strlen(targetName)+2)*sizeof(char));
538      sprintf(targetUrl,"%s/%s",tmpUrl->value,targetName);
539      free(targetName);
540      setMapInMaps(*real_outputs,input->name,"generated_file",targetPath);
541      addToMap(input->content,"generated_url",targetUrl);
542      free(targetUrl);
543      {
544        parameters_cnt+=1;
545        if(parameters_cnt==1)
546          parameters=(char**)malloc(parameters_cnt*sizeof(char*));
547        else
548          parameters=(char**)realloc(parameters,parameters_cnt*sizeof(char*));
549        // We should verify if any optional tag for output is required
550        // (i.e. -out output.tiff *int8*), meaning that we should search
551        // for a corresponding inputs name.
552        map* inValue=getMapFromMaps(*real_inputs,input->name,"value");
553        if(inValue!=NULL){
554          parameters[parameters_cnt-1]=(char*)malloc((strlen(input->name)+strlen(targetPath)+strlen(inValue->value)+4)*sizeof(char));
555          sprintf(parameters[parameters_cnt-1],"-%s %s %s",input->name,targetPath,inValue->value);
556        }else{
557          parameters[parameters_cnt-1]=(char*)malloc((strlen(input->name)+strlen(targetPath)+3)*sizeof(char));
558          sprintf(parameters[parameters_cnt-1],"-%s %s",input->name,targetPath);
559        }
560      }
561      free(targetPath);
562    }// In other case it means we need to return the cache_file as generated_file
563    else{
564      // Name every files that should be produced by the service execution
565      map* mime=getMap(input->child->content,"mimeType");
566      char* targetName;
567      if(mime!=NULL){
568        bool hasExt=false;
569        map* fileExt=getFileExtensionMap(mime->value,&hasExt);
570        targetName=(char*)malloc((strlen(s->name)+strlen(input->name)+strlen(uuid->value)+strlen(fileExt->value)+11)*sizeof(char));
571        sprintf(targetName,"output_%s_%s_%s.%s",s->name,input->name,uuid->value,fileExt->value);
572        freeMap(&fileExt);
573        free(fileExt);
574      }else{
575        targetName=(char*)malloc((strlen(s->name)+strlen(input->name)+strlen(uuid->value)+14)*sizeof(char));
576        sprintf(targetName,"output_%s_%s_%s.tif",s->name,input->name,uuid->value);
577      }
578      char *targetPath=(char*)malloc((strlen(targetPathMap->value)+strlen(targetName)+2)*sizeof(char));
579      sprintf(targetPath,"%s/%s",targetPathMap->value,targetName);
580      map *tmpUrl=getMapFromMaps(*main_conf,"main","tmpUrl");
581      char *targetUrl=(char*)malloc((strlen(tmpUrl->value)+strlen(targetName)+2)*sizeof(char));
582      sprintf(targetUrl,"%s/%s",tmpUrl->value,targetName);
583      free(targetName);
584      addToMap(input->content,"generated_file",targetPath);
585      addToMap(input->content,"storage",targetPath);
586      addToMap(input->content,"generated_url",targetUrl);
587      free(targetUrl);
588      if(strcasecmp(input->name,"wms_link")!=0&&
589         strcasecmp(input->name,"wcs_link")!=0 &&
590         strcasecmp(input->name,"wfs_link")!=0){
591        parameters_cnt+=1;
592        if(parameters_cnt==1)
593          parameters=(char**)malloc(parameters_cnt*sizeof(char*));
594        else
595          parameters=(char**)realloc(parameters,parameters_cnt*sizeof(char*));
596        // We should verify if any optional tag for output is required
597        // (i.e. -out output.tiff *int8*), meaning that we should search
598        // for a corresponding inputs name.
599        map* inValue=getMapFromMaps(*real_inputs,input->name,"value");
600        if(inValue!=NULL){
601          parameters[parameters_cnt-1]=(char*)malloc((strlen(input->name)+strlen(targetPath)+strlen(inValue->value)+4)*sizeof(char));
602          sprintf(parameters[parameters_cnt-1],"-%s %s %s",input->name,targetPath,inValue->value);
603        }else{
604          parameters[parameters_cnt-1]=(char*)malloc((strlen(input->name)+strlen(targetPath)+3)*sizeof(char));
605          sprintf(parameters[parameters_cnt-1],"-%s %s",input->name,targetPath);
606        }
607      }
608      free(targetPath);
609    }
610    input=input->next;
611  }
612  // Produce the SBATCH File locally
613  char *scriptPath=(char*)malloc((strlen(s->name)+strlen(tmpPath->value)+strlen(uuid->value)+10)*sizeof(char));
614  sprintf(scriptPath,"%s/zoo_%s_%s.sh",tmpPath->value,s->name,uuid->value);
615  setMapInMaps(*main_conf,"lenv","local_script",scriptPath);
616#ifdef HPC_DEBUG
617  fprintf(stderr,"************************* %s %d \n\n",__FILE__,__LINE__);
618  fflush(stderr);
619#endif
620#ifdef USE_CALLBACK
621  invokeCallback(m,inputs,NULL,3,0);
622#endif
623#ifdef HPC_DEBUG
624  fprintf(stderr,"************************* %s %d \n\n",__FILE__,__LINE__);
625  fflush(stderr);
626#endif
627  FILE* scriptFile=fopen(scriptPath,"w+");
628  map* headerMap=getMapFromMaps(*main_conf,configurationId,"jobscript_header");
629  if(headerMap!=NULL){
630    // Use the header file if defined in the HPC section of the main.cfg file
631    struct stat f_status;
632    int s=stat(headerMap->value, &f_status);
633    if(s==0){
634      char* fcontent=(char*)malloc(sizeof(char)*(f_status.st_size+1));
635      FILE* f=fopen(headerMap->value,"rb");
636      fread(fcontent,f_status.st_size,1,f);
637      int fsize=f_status.st_size;
638      fcontent[fsize]=0;
639      fclose(f);
640      fprintf(scriptFile,"%s\n### --- ZOO-Service HEADER end --- ###\n\n",fcontent);
641      free(fcontent);
642    }else
643      fprintf(scriptFile,"#!/bin/bash\n\n### *** Default ZOO-Service HEADER (no header found) *** ###\n\n");
644  }else
645    fprintf(scriptFile,"#!/bin/bash\n\n### *** Default ZOO-Service HEADER *** ###\n\n");
646  maps* hpc_opts=getMaps(*main_conf,configurationId);
647  if(hpc_opts!=NULL){
648    map* hpc_opts_content=hpc_opts->content;
649    while(hpc_opts_content!=NULL){
650      if(strncasecmp(hpc_opts_content->name,"sbatch_options_",15)==0)
651        fprintf(scriptFile,"#SBATCH --%s=%s\n",strstr(hpc_opts_content->name,"sbatch_options_")+15,hpc_opts_content->value);
652      hpc_opts_content=hpc_opts_content->next;
653    }
654  }
655  fprintf(scriptFile,"#SBATCH --job-name=ZOO-Project_%s_%s\n\n",uuid->value,s->name);
656  map* mods=getMap(s->content,"hpcModules");
657  if(mods!=NULL)
658    fprintf(scriptFile,"#SBATCH --export=MODULES=%s\n",mods->value);
659
660  map* bodyMap=getMapFromMaps(*main_conf,configurationId,"jobscript_body");
661  if(bodyMap!=NULL){
662    // Use the header file if defined in the HPC section of the main.cfg file
663    struct stat f_status;
664    int s=stat(bodyMap->value, &f_status);
665    if(s==0){
666      char* fcontent=(char*)malloc(sizeof(char)*(f_status.st_size+1));
667      FILE* f=fopen(bodyMap->value,"rb");
668      fread(fcontent,f_status.st_size,1,f);
669      int fsize=f_status.st_size;
670      fcontent[fsize]=0;
671      fclose(f);
672      fprintf(scriptFile,"%s\n### --- ZOO-Service BODY end --- ###\n\n",fcontent);
673      free(fcontent);
674    }else
675      fprintf(scriptFile,"\n### *** Default ZOO-Service BODY (no body found) *** ###\n\n");
676  }else
677    fprintf(scriptFile,"\n### *** Default ZOO-Service BODY *** ###\n\n");
678
679  map* sp=getMap(s->content,"serviceProvider");
680 
681  // Require to produce the command line to be executed
682  fprintf(scriptFile,"\n\necho \"Job started at: $(date)\"\n");
683  fprintf(scriptFile,"echo \"Running service: [%s]\"\n",sp->value);
684  fprintf(scriptFile,"%s ",sp->value);
685  for(int i=0;i<parameters_cnt;i++){
686    fprintf(scriptFile," %s",parameters[i]);
687  }
688  for(int i=parameters_cnt-1;i>=0;i--){
689    free(parameters[i]);
690  }
691  free(parameters);
692  fprintf(scriptFile,"\n");
693  fprintf(scriptFile,"echo \"Job finished at: $(date)\"\n");
694  map* footerMap=getMapFromMaps(*main_conf,configurationId,"jobscript_footer");
695  if(footerMap!=NULL){
696    // Use the footer file if defined in the HPC section of the main.cfg file
697    struct stat f_status;
698    int s=stat(footerMap->value, &f_status);
699    if(s==0){
700      char* fcontent=(char*)malloc(sizeof(char)*(f_status.st_size+1));
701      FILE* f=fopen(footerMap->value,"rb");
702      fread(fcontent,f_status.st_size,1,f);
703      int fsize=f_status.st_size;
704      fcontent[fsize]=0;
705      fclose(f);
706      char* ffcontent=(char*)malloc((strlen(fcontent)+(3*strlen(uuid->value))+1)*sizeof(char));
707      sprintf(ffcontent,fcontent,uuid->value,uuid->value,uuid->value);
708      fprintf(scriptFile,"%s\n### --- ZOO-Service FOOTER end --- ###\n\n",ffcontent);
709      free(fcontent);
710    }else
711      fprintf(scriptFile,"### *** Default ZOO-Service FOOTER (footer file failed to load) *** ###\n\n");
712  }else
713      fprintf(scriptFile,"### *** Default ZOO-Service FOOTER (no footer found) *** ###\n\n");
714  fflush(scriptFile);
715  fclose(scriptFile);
716#ifdef HPC_DEBUG
717  fprintf(stderr,"************************* %s %d \n\n",__FILE__,__LINE__);
718#endif
719#ifdef USE_CALLBACK
720  invokeCallback(m,inputs,NULL,3,1);
721#endif
722#ifdef HPC_DEBUG
723  fprintf(stderr,"************************* %s %d \n\n",__FILE__,__LINE__);
724#endif
725
726  // Upload the SBATCH File to the remote host
727#ifdef HPC_DEBUG
728  fprintf(stderr,"************************* %s %d \n\n",__FILE__,__LINE__);
729#endif
730#ifdef USE_CALLBACK
731  invokeCallback(m,inputs,NULL,4,0);
732#endif
733#ifdef HPC_DEBUG
734  fprintf(stderr,"************************* %s %d \n\n",__FILE__,__LINE__);
735#endif
736  targetPathMap=getMapFromMaps(*main_conf,configurationId,"remote_work_path");
737  if(targetPathMap==NULL){
738    setMapInMaps(*main_conf,"lenv","message",_("There is no remote_work_path defined in your section!"));
739    setMapInMaps(*main_conf,"lenv","status","failed");
740    errorException (*main_conf, _("There is no remote_work_path defined in your section!"),
741                    "InternalError", NULL);
742#ifdef HPC_DEBUG
743    fprintf(stderr,"************************* %s %d \n\n",__FILE__,__LINE__);
744    fflush(stderr);
745#endif
746#ifdef USE_CALLBACK
747    invokeCallback(*main_conf,NULL,NULL,7,0);
748#endif
749#ifdef HPC_DEBUG
750    fprintf(stderr,"************************* %s %d \n\n",__FILE__,__LINE__);
751    fflush(stderr);
752#endif
753    return SERVICE_FAILED;
754  }
755  char* targetName=strrchr(scriptPath,'/');
756  char *targetPath=(char*)malloc((strlen(targetPathMap->value)+strlen(targetName)+2)*sizeof(char));
757  sprintf(targetPath,"%s/%s",targetPathMap->value,targetName);
758  setMapInMaps(*main_conf,"lenv","remote_script",targetPath);
759  SSHCON *test=ssh_connect(*main_conf);
760  int copy0=ssh_copy(*main_conf,scriptPath,targetPath,ssh_get_cnt(*main_conf));
761  unlink(scriptPath);
762  free(scriptPath);
763  if(copy0!=true){
764    setMapInMaps(*main_conf,"lenv","message",_("Unable to upload the script"));
765#ifdef USE_CALLBACK
766    invokeCallback(*main_conf,NULL,NULL,7,0);
767#endif
768    errorException(*main_conf,_("Unable to upload the script"),"NoApplicableCode",NULL);
769    return -1;
770  }
771  // Execute the SBATCH script remotely
772  addReadLocks(main_conf);
773  map* subStr=getMapFromMaps(*main_conf,configurationId,"sbatch_substr");
774  char *command=(char*)malloc((strlen(targetPath)+strlen(targetPathMap->value)+strlen(subStr->value)+strlen(uuid->value)+137)*sizeof(char));
775  sprintf(command,"sbatch %s 2> %s/error_%s.log | sed \"s:%s::g\"",targetPath,targetPathMap->value,uuid->value,subStr->value);
776  if(ssh_exec(*main_conf,command,ssh_get_cnt(m))<=0){
777    // The sbatch command has failed!
778    // Download the error log file from the HPC server
779    char tmpS[1024];
780    free(command);
781    command=(char*)malloc((strlen(targetPathMap->value)+strlen(uuid->value)+11)*sizeof(char));
782    sprintf(command,"%s/error_%s.log",targetPathMap->value,uuid->value);
783    targetName=strrchr(command,'/');
784    free(targetPath);
785    targetPath=(char*)malloc((strlen(tmpPath->value)+strlen(targetName)+2)*sizeof(char));
786    sprintf(targetPath,"%s/%s",tmpPath->value,targetName);
787    if(ssh_fetch(*main_conf,targetPath,command,ssh_get_cnt(m))==0){
788      struct stat f_status;
789      int ts=stat(targetPath, &f_status);
790      if(ts==0) {
791        char* fcontent = NULL;
792        fcontent=(char*)malloc(sizeof(char)*(f_status.st_size+1));
793        FILE* f=fopen(targetPath,"rb");
794        fread(fcontent,f_status.st_size,1,f);
795        int fsize=f_status.st_size;
796        fcontent[fsize]=0;
797        fclose(f);
798        setMapInMaps(*main_conf,"lenv","message",fcontent);
799        free(fcontent);
800      }else
801        setMapInMaps(*main_conf,"lenv","message",_("No message provided"));
802    }else
803      setMapInMaps(*main_conf,"lenv","message",_("Unable to fetch the remote error log file"));
804    tmpPath=getMapFromMaps(m,"lenv","message");
805#ifdef HPC_DEBUG
806    fprintf(stderr,"************************* %s %d \n\n",__FILE__,__LINE__);
807    fflush(stderr);
808#endif
809#ifdef USE_CALLBACK
810    invokeCallback(*main_conf,NULL,NULL,7,0);
811#endif
812#ifdef HPC_DEBUG
813    fprintf(stderr,"************************* %s %d \n\n",__FILE__,__LINE__);
814    fflush(stderr);
815#endif
816    sprintf(tmpS, "Cannot execute the HPC ZOO-Service %s using %s: %s", s->name, configurationId, tmpPath->value);
817    errorException(*main_conf,tmpS,"NoApplicableCode",NULL);
818    free(command);
819    free(targetPath);
820    ssh_close(*main_conf);
821    removeReadLocks(main_conf);
822    return -1;
823  }
824  free(targetPath);
825#ifdef HPC_DEBUG
826  fprintf(stderr,"************************* %s %d \n\n",__FILE__,__LINE__);
827  fflush(stderr);
828#endif
829#ifdef USE_CALLBACK
830  invokeCallback(m,NULL,NULL,4,1);
831#endif
832#ifdef HPC_DEBUG
833  fprintf(stderr,"************************* %s %d \n\n",__FILE__,__LINE__);
834  fflush(stderr);
835#endif
836  free(command);
837#ifdef HPC_DEBUG
838  fprintf(stderr,"************************* %s %d \n\n",__FILE__,__LINE__);
839  fflush(stderr);
840#endif
841
842  struct sockaddr_un addr;
843  memset(&addr, 0, sizeof(addr));
844  addr.sun_family = AF_UNIX;
845  int rc, cl, fd = socket(AF_UNIX, SOCK_STREAM, 0);
846  char *sname=(char*)malloc((strlen(tmpPath->value)+strlen(uuid->value)+20));
847  sprintf(sname,"%s/.wait_socket_%s.sock",tmpPath->value,uuid->value);
848  strncpy(addr.sun_path, sname, sizeof(addr.sun_path)-1);
849 
850  if (bind(fd, (struct sockaddr*)&addr, sizeof(addr)) == -1) {
851    perror("bind error");
852    setMapInMaps(*main_conf,"lenv","message",_("Unable to bind socket!"));
853    errorException (*main_conf, _("Unable to bind socket!"),
854                    "InternalError", NULL);
855#ifdef HPC_DEBUG
856    fprintf(stderr,"************************* %s %d \n\n",__FILE__,__LINE__);
857    fflush(stderr);
858#endif
859#ifdef USE_CALLBACK
860    invokeCallback(*main_conf,NULL,NULL,7,0);
861#endif
862    removeReadLocks(main_conf);
863#ifdef HPC_DEBUG
864    fprintf(stderr,"************************* %s %d \n\n",__FILE__,__LINE__);
865    fflush(stderr);
866#endif
867    return -1;
868  }
869#ifdef HPC_DEBUG
870  fprintf(stderr,"************************* %s %d \n\n",__FILE__,__LINE__);
871  fflush(stderr);
872#endif
873  if (listen(fd, 5) == -1) {
874    setMapInMaps(*main_conf,"lenv","message",_("Listen error"));
875    errorException (*main_conf, _("Listen error"),
876                    "InternalError", NULL);
877#ifdef HPC_DEBUG
878    fprintf(stderr,"************************* %s %d \n\n",__FILE__,__LINE__);
879    fflush(stderr);
880#endif
881#ifdef USE_CALLBACK
882    invokeCallback(*main_conf,NULL,NULL,7,0);
883#endif
884    removeReadLocks(main_conf);
885#ifdef HPC_DEBUG
886    fprintf(stderr,"************************* %s %d \n\n",__FILE__,__LINE__);
887    fflush(stderr);
888#endif
889    return -1;
890  }
891  if ( (cl = accept(fd, NULL, NULL)) == -1) {
892    setMapInMaps(*main_conf,"lenv","message",_("Accept error"));
893    errorException (*main_conf, _("Accept error"),
894                    "InternalError", NULL);
895#ifdef HPC_DEBUG
896    fprintf(stderr,"************************* %s %d \n\n",__FILE__,__LINE__);
897    fflush(stderr);
898#endif
899#ifdef USE_CALLBACK
900    invokeCallback(*main_conf,NULL,NULL,7,0);
901#endif
902    removeReadLocks(main_conf);
903#ifdef HPC_DEBUG
904    fprintf(stderr,"************************* %s %d \n\n",__FILE__,__LINE__);
905    fflush(stderr);
906#endif
907    return -1;
908  }else{
909#ifdef HPC_DEBUG
910    fprintf(stderr,"************************* %s %d \n\n",__FILE__,__LINE__);
911    fflush(stderr);
912#endif
913    int hasPassed=-1;
914    char buf[11];
915    memset(&buf,0,11);
916    while ( (rc=read(cl,buf,10)) ) {     
917      if(rc==0){
918        setMapInMaps(*main_conf,"lenv","message",_("Read closed"));
919        errorException (*main_conf, _("Read closed"),
920                        "InternalError", NULL);
921#ifdef HPC_DEBUG
922        fprintf(stderr,"************************* %s %d \n\n",__FILE__,__LINE__);
923        fflush(stderr);
924#endif
925#ifdef USE_CALLBACK
926        invokeCallback(*main_conf,NULL,NULL,7,0);
927#endif
928        removeReadLocks(main_conf);
929#ifdef HPC_DEBUG
930        fprintf(stderr,"************************* %s %d \n\n",__FILE__,__LINE__);
931        fflush(stderr);
932#endif
933        return -1;
934      }else{
935        if(rc<0){
936          setMapInMaps(*main_conf,"lenv","message",_("Read error"));
937          errorException (*main_conf, _("Read error"),
938                          "InternalError", NULL);
939#ifdef HPC_DEBUG
940          fprintf(stderr,"************************* %s %d \n\n",__FILE__,__LINE__);
941          fflush(stderr);
942#endif
943#ifdef USE_CALLBACK
944          invokeCallback(*main_conf,NULL,NULL,7,0);
945#endif
946          removeReadLocks(main_conf);
947#ifdef HPC_DEBUG
948          fprintf(stderr,"************************* %s %d \n\n",__FILE__,__LINE__);
949          fflush(stderr);
950#endif
951          return -1;
952        }
953      }
954      hasPassed=1;
955      res=atoi(buf);
956      unlink(sname);
957      free(sname);
958      removeReadLocks(main_conf);
959 
960      if(res==3){
961#ifdef HPC_DEBUG
962        fprintf(stderr,"************************* %s %d \n\n",__FILE__,__LINE__);
963        fflush(stderr);
964#endif
965#ifdef USE_CALLBACK
966        invokeCallback(m,NULL,outputs,5,0);
967#endif
968#ifdef HPC_DEBUG
969        fprintf(stderr,"************************* %s %d \n\n",__FILE__,__LINE__);
970        fflush(stderr);
971#endif
972
973        // Read informations provided by FinalizeHPC as a configuration file
974        // then, remove the file.
975        map* jobid=getMapFromMaps(*main_conf,"lenv","usid");
976        map* tmpPath=getMapFromMaps(*main_conf,"main","tmpPath");
977        char *filePath=(char*)malloc((strlen(tmpPath->value)+strlen(jobid->value)+15)*sizeof(char));
978        sprintf(filePath,"%s/exec_status_%s",tmpPath->value,jobid->value);
979        maps* lm = (maps *) malloc (MAPS_SIZE);
980        lm->child=NULL;
981        lm->next=NULL;
982        int saved_stdout = dup (fileno (stdout));
983        dup2 (fileno (stderr), fileno (stdout));
984        conf_read(filePath,lm);
985        //dumpMaps(m);
986        fflush(stdout);
987        dup2 (saved_stdout, fileno (stdout));
988        close(saved_stdout);
989        unlink(filePath);
990        free(filePath);
991        addMapsToMaps(main_conf,lm);
992        freeMaps(&lm);
993        free(lm);
994
995        input=*real_outputs;
996        while(input!=NULL){
997          if(input->child==NULL){
998            map* generatedFile=getMap(input->content,"generated_file");
999            if(generatedFile!=NULL){
1000              char* filename=strrchr(generatedFile->value,'/');
1001              char* targetPath=(char*)malloc((strlen(tmpPath->value)+strlen(filename)+2)*sizeof(char));
1002              sprintf(targetPath,"%s/%s",tmpPath->value,filename);
1003              test=ssh_connect(*main_conf);
1004              if(ssh_fetch(*main_conf,targetPath,generatedFile->value,ssh_get_cnt(m))==0){
1005                setMapInMaps(*real_outputs,input->name,"generated_file",targetPath);
1006                free(targetPath);
1007              }else{
1008                map* hpcStdErr=getMapFromMaps(*main_conf,"henv","StdErr");
1009                // Added for using sacct in place of scontrol
1010                char *sourcePath=NULL;
1011                if(hpcStdErr!=NULL){
1012                  sourcePath=(char*)malloc((strlen(targetPathMap->value)+strlen(hpcStdErr->value)+2)*sizeof(char));
1013                  sprintf(sourcePath,"%s/%s",targetPathMap->value,hpcStdErr->value);
1014                }
1015                if(hpcStdErr!=NULL && sourcePath!=NULL && ssh_fetch(*main_conf,targetPath,sourcePath,ssh_get_cnt(m))==0){
1016                  free(sourcePath);
1017                  struct stat f_status;
1018                  int ts=stat(targetPath, &f_status);
1019                  if(ts==0) {
1020                    char* fcontent = NULL;
1021                    fcontent=(char*)malloc(sizeof(char)*(f_status.st_size+1));
1022                    FILE* f=fopen(targetPath,"rb");
1023                    fread(fcontent,f_status.st_size,1,f);
1024                    int fsize=f_status.st_size;
1025                    fcontent[fsize]=0;
1026                    fclose(f);
1027                    setMapInMaps(*main_conf,"lenv","message",fcontent);
1028                    free(fcontent);
1029                  }else{
1030                    char *tmpStr=(char*)malloc((strlen(targetPath)+strlen(_("Unable to fetch the remote file for %s"))+1)*sizeof(char));
1031                    sprintf(tmpStr,_("Unable to fetch the remote file for %s"),targetPath);
1032                    setMapInMaps(*main_conf,"lenv","message",tmpStr);
1033                    free(tmpStr);
1034                  }
1035                }else{
1036                  char *tmpStr=(char*)malloc((strlen(filename)+strlen(_("Unable to fetch the remote file for %s"))+1)*sizeof(char));
1037                  sprintf(tmpStr,_("Unable to fetch the remote file for %s"),filename);
1038                  setMapInMaps(*main_conf,"lenv","message",tmpStr);
1039                  free(tmpStr);
1040                }
1041#ifdef USE_CALLBACK
1042                invokeCallback(*main_conf,NULL,NULL,7,0);
1043#endif
1044                return SERVICE_FAILED;
1045              }
1046            }
1047          }else{
1048            map* generatedFile=getMap(input->content,"generated_file");
1049            map* generatedUrl=getMap(input->content,"generated_url");
1050            if(generatedFile!=NULL){
1051              char* filename=strrchr(generatedFile->value,'/');
1052              char* targetPath=(char*)malloc((strlen(tmpPath->value)+strlen(filename)+2)*sizeof(char));
1053              sprintf(targetPath,"%s/%s",tmpPath->value,filename);
1054              test=ssh_connect(*main_conf);
1055              if(ssh_fetch(*main_conf,targetPath,generatedFile->value,ssh_get_cnt(m))==0){
1056                maps* tmp=getMaps(*real_outputs,input->name);
1057                char serviceName[9];
1058                freeMap(&tmp->content);
1059                free(tmp->content);
1060                tmp->content=NULL;
1061                maps* output=getMaps(*real_outputs,input->name);
1062                setMapInMaps(output->child,"download_link","generated_file",targetPath);
1063                setMapInMaps(output->child,"download_link","generated_url",generatedUrl->value);
1064                setMapInMaps(output->child,"download_link","storage",targetPath);
1065                setMapInMaps(output->child,"download_link","useMapserver","false");
1066                setMapInMaps(output->child,"download_link","replicateStorageNext","true");
1067                setMapInMaps(output->child,"download_link","asReference","true");
1068                setMapInMaps(output->child,"download_link","inRequest","true");
1069                setMapInMaps(output->child,"wms_link","generated_file",targetPath);
1070                setMapInMaps(output->child,"wms_link","storage",targetPath);
1071                setMapInMaps(output->child,"wms_link","useMapserver","true");
1072                setMapInMaps(output->child,"wms_link","msOgc","WMS");
1073                setMapInMaps(output->child,"wms_link","requestedMimeType","image/png");
1074                setMapInMaps(output->child,"wms_link","asReference","true");
1075                if(getMaps(output->child,"wcs_link")!=NULL){
1076                  sprintf(serviceName,"wcs_link");
1077                  setMapInMaps(output->child,"wcs_link","msOgc","WCS");
1078                }else{
1079                  sprintf(serviceName,"wfs_link");
1080                  setMapInMaps(output->child,"wfs_link","msOgc","WFS");
1081                }
1082                setMapInMaps(output->child,serviceName,"storage",targetPath);
1083                setMapInMaps(output->child,serviceName,"generated_file",targetPath);
1084                setMapInMaps(output->child,serviceName,"useMapserver","true");
1085                setMapInMaps(output->child,serviceName,"asReference","true");
1086              }else{
1087                map* hpcStdErr=getMapFromMaps(*main_conf,"henv","StdErr");
1088                char *sourcePath=NULL;
1089                if(hpcStdErr!=NULL){
1090                  dumpMap(hpcStdErr);
1091                  sourcePath=(char*)malloc((strlen(targetPathMap->value)+strlen(hpcStdErr->value)+2)*sizeof(char));
1092                  sprintf(sourcePath,"%s/%s",targetPathMap->value,hpcStdErr->value);
1093                }
1094                if(hpcStdErr!=NULL && sourcePath!=NULL && ssh_fetch(*main_conf,targetPath,sourcePath,ssh_get_cnt(m))==0){
1095                  free(sourcePath);
1096                  struct stat f_status;
1097                  int ts=stat(targetPath, &f_status);
1098                  if(ts==0) {
1099                    char* fcontent = NULL;
1100                    fcontent=(char*)malloc(sizeof(char)*(f_status.st_size+1));
1101                    FILE* f=fopen(targetPath,"rb");
1102                    fread(fcontent,f_status.st_size,1,f);
1103                    int fsize=f_status.st_size;
1104                    fcontent[fsize]=0;
1105                    fclose(f);
1106                    setMapInMaps(*main_conf,"lenv","message",fcontent);
1107                    free(fcontent);
1108                  }else{
1109                    char *tmpStr=(char*)malloc((strlen(targetPath)+strlen(_("Unable to fetch the remote file for %s"))+1)*sizeof(char));
1110                    sprintf(tmpStr,_("Unable to fetch the remote file for %s"),targetPath);
1111                    setMapInMaps(*main_conf,"lenv","message",tmpStr);
1112                    free(tmpStr);
1113                  }
1114                }else{
1115                  char *tmpStr=(char*)malloc((strlen(sourcePath)+strlen(_("Unable to fetch the remote file for %s"))+1)*sizeof(char));
1116                  sprintf(tmpStr,_("Unable to fetch the remote file for %s"),sourcePath);
1117                  setMapInMaps(*main_conf,"lenv","message",tmpStr);
1118                  free(tmpStr);
1119                }
1120#ifdef USE_CALLBACK
1121                invokeCallback(*main_conf,NULL,NULL,7,0);
1122#endif
1123                return SERVICE_FAILED;
1124              }
1125              free(targetPath);
1126            }
1127          }
1128          input=input->next;
1129        }
1130
1131      }else{
1132        // Try to access remotely to the log file and return a more relevant error message
1133        setMapInMaps(*main_conf,"lenv","message",_("HPC Execution failed!"));
1134        errorException (*main_conf, _("HPC Execution failed!"),
1135                        "InternalError", NULL);
1136#ifdef HPC_DEBUG
1137        fprintf(stderr,"************************* %s %d \n\n",__FILE__,__LINE__);
1138        fflush(stderr);
1139#endif
1140#ifdef USE_CALLBACK
1141        invokeCallback(*main_conf,NULL,NULL,7,0);
1142#endif
1143#ifdef HPC_DEBUG
1144        fprintf(stderr,"************************* %s %d \n\n",__FILE__,__LINE__);
1145        fflush(stderr);
1146#endif
1147      }
1148    }
1149    if(hasPassed<0){
1150      perror("Failed to read");
1151      setMapInMaps(*main_conf,"lenv","message",_("Unable to parse the value returned by remote execution"));
1152      errorException (*main_conf, _("Unable to parse the value returned by remote execution"),
1153                      "InternalError", NULL);
1154#ifdef HPC_DEBUG
1155      fprintf(stderr,"************************* %s %d \n\n",__FILE__,__LINE__);
1156      fflush(stderr);
1157#endif
1158#ifdef USE_CALLBACK
1159      invokeCallback(*main_conf,NULL,NULL,7,0);
1160#endif
1161#ifdef HPC_DEBUG
1162      fprintf(stderr,"************************* %s %d \n\n",__FILE__,__LINE__);
1163      fflush(stderr);
1164#endif
1165      return SERVICE_FAILED;
1166    }
1167  }
1168#ifdef HPC_DEBUG
1169  fprintf(stderr,"************************* %s %d \n\n",__FILE__,__LINE__);
1170  fflush(stderr);
1171#endif
1172  ssh_close(*main_conf);
1173#ifdef HPC_DEBUG
1174  fprintf(stderr,"************************* %s %d \n\n",__FILE__,__LINE__);
1175  fflush(stderr);
1176#endif
1177  return res;
1178}
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